IL_8S8J_027
3D structure
- PDB id
- 8S8J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-eIF5)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GAUAC*GUAAUU
- Length
- 11 nucleotides
- Bulged bases
- 8S8J|1|2|A|505
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8S8J|1|2|G|479
8S8J|1|2|A|480
8S8J|1|2|U|481
8S8J|1|2|A|482
8S8J|1|2|C|483
*
8S8J|1|2|G|502
8S8J|1|2|U|503
8S8J|1|2|A|504
8S8J|1|2|A|505
8S8J|1|2|U|506
8S8J|1|2|U|507
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain J
- KLLA0E23673p
- Chain e
- 40S ribosomal protein S30
Coloring options: