IL_8S8J_075
3D structure
- PDB id
- 8S8J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-eIF5)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GCCAGCGAG*CUUGUGAAAC
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8S8J|1|2|G|1478
8S8J|1|2|C|1479
8S8J|1|2|C|1480
8S8J|1|2|A|1481
8S8J|1|2|G|1482
8S8J|1|2|C|1483
8S8J|1|2|G|1484
8S8J|1|2|A|1485
8S8J|1|2|G|1486
*
8S8J|1|2|C|1516
8S8J|1|2|U|1517
8S8J|1|2|U|1518
8S8J|1|2|G|1519
8S8J|1|2|U|1520
8S8J|1|2|G|1521
8S8J|1|2|A|1522
8S8J|1|2|A|1523
8S8J|1|2|A|1524
8S8J|1|2|C|1525
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain D
- 40S ribosomal protein S3
- Chain F
- KLLA0D10659p
- Chain Q
- Small ribosomal subunit protein uS9
- Chain T
- KLLA0A07194p
- Chain U
- Small ribosomal subunit protein uS10
- Chain Z
- 40S ribosomal protein S25
- Chain d
- Small ribosomal subunit protein uS14
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