IL_8S8K_044

3D structure

PDB id

8S8K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a yeast 48S-AUC preinitiation complex in swivelled conformation (model py48S-AUC-swiv-eIF1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UGGUUC*GGACCA

Length

12 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8S8K|1|2|U|821
8S8K|1|2|G|822
8S8K|1|2|G|823
8S8K|1|2|U|824
8S8K|1|2|U|825
8S8K|1|2|C|826
*
8S8K|1|2|G|844
8S8K|1|2|G|845
8S8K|1|2|A|846
8S8K|1|2|C|847
8S8K|1|2|C|848
8S8K|1|2|A|849

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain L

KLLA0A10483p