IL_8SCB_037

3D structure

PDB id

8SCB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Terminating ribosome with SRI-41315

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

AAGG*CAGCAGCAGCU

Length

15 nucleotides

Bulged bases

8SCB|1|5|A|932, 8SCB|1|5|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8SCB|1|5|A|732
8SCB|1|5|A|733
8SCB|1|5|G|734
8SCB|1|5|G|735
*
8SCB|1|5|C|928
8SCB|1|5|A|929
8SCB|1|5|G|930
8SCB|1|5|C|931
8SCB|1|5|A|932
8SCB|1|5|G|933
8SCB|1|5|C|934
8SCB|1|5|A|935
8SCB|1|5|G|935|||A
8SCB|1|5|C|936
8SCB|1|5|U|937

Current chains

Chain 5

28S_rRNA

Nearby chains

Chain C

60S ribosomal protein L4

Chain M

60S ribosomal protein L14

Chain S

eL20