IL_8SCB_056
3D structure
- PDB id
- 8SCB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Terminating ribosome with SRI-41315
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- CGAAG*UGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8SCB_056 not in the Motif Atlas
- Geometric match to IL_4V9F_027
- Geometric discrepancy: 0.0725
- The information below is about IL_4V9F_027
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_15190.1
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
8SCB|1|5|C|1551
8SCB|1|5|G|1552
8SCB|1|5|A|1553
8SCB|1|5|A|1554
8SCB|1|5|G|1555
*
8SCB|1|5|U|1572
8SCB|1|5|G|1573
8SCB|1|5|G|1574
8SCB|1|5|A|1575
8SCB|1|5|G|1576
Current chains
- Chain 5
- 28S_rRNA
Nearby chains
- Chain A
- Ribosomal protein L8
- Chain R
- Ribosomal protein L19
- Chain p
- eL43
Coloring options: