IL_8SCB_066

3D structure

PDB id

8SCB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Terminating ribosome with SRI-41315

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GAUUAGA*UA(PSU)(PSU)CUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8SCB|1|5|G|1745
8SCB|1|5|A|1746
8SCB|1|5|U|1747
8SCB|1|5|U|1748
8SCB|1|5|A|1749
8SCB|1|5|G|1750
8SCB|1|5|A|1751
*
8SCB|1|5|U|1779
8SCB|1|5|A|1780
8SCB|1|5|PSU|1781
8SCB|1|5|PSU|1782
8SCB|1|5|C|1783
8SCB|1|5|U|1784
8SCB|1|5|C|1785

Current chains

Chain 5

28S_rRNA

Nearby chains

Chain 7

5S ribosomal RNA; 5S rRNA

Chain D

Ribosomal_L18_c domain-containing protein

Chain I

60S ribosomal protein L10