IL_8SCB_117

3D structure

PDB id

8SCB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Terminating ribosome with SRI-41315

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

G(PSU)CA(A2M)AGU*AA(PSU)GAAGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8SCB|1|5|G|3714
8SCB|1|5|PSU|3715
8SCB|1|5|C|3716
8SCB|1|5|A|3717
8SCB|1|5|A2M|3718
8SCB|1|5|A|3719
8SCB|1|5|G|3720
8SCB|1|5|U|3721
*
8SCB|1|5|A|3732
8SCB|1|5|A|3733
8SCB|1|5|PSU|3734
8SCB|1|5|G|3735
8SCB|1|5|A|3736
8SCB|1|5|A|3737
8SCB|1|5|G|3738
8SCB|1|5|C|3739

Current chains

Chain 5

28S_rRNA

Nearby chains

Chain 3

Transfer RNA; tRNA

Chain A

Ribosomal protein L8

Chain i

60S ribosomal protein L36

Chain o

eL42