IL_8SCB_119

3D structure

PDB id

8SCB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Terminating ribosome with SRI-41315

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

C(5MC)AA(A2M)UGCCUC(OMG)U*A(OMC)GCG

Length

18 nucleotides

Bulged bases

8SCB|1|5|C|3791

QA status

Modified nucleotides: 5MC, A2M, OMG, OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8SCB|1|5|C|3781
8SCB|1|5|5MC|3782
8SCB|1|5|A|3783
8SCB|1|5|A|3784
8SCB|1|5|A2M|3785
8SCB|1|5|U|3786
8SCB|1|5|G|3787
8SCB|1|5|C|3788
8SCB|1|5|C|3789
8SCB|1|5|U|3790
8SCB|1|5|C|3791
8SCB|1|5|OMG|3792
8SCB|1|5|U|3793
*
8SCB|1|5|A|3807
8SCB|1|5|OMC|3808
8SCB|1|5|G|3809
8SCB|1|5|C|3810
8SCB|1|5|G|3811

Current chains

Chain 5

28S_rRNA

Nearby chains

Chain 9

Small subunit ribosomal RNA; SSU rRNA

Chain ii

Eukaryotic peptide chain release factor subunit 1

Chain n

eL41