IL_8SCB_133
3D structure
- PDB id
- 8SCB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Terminating ribosome with SRI-41315
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- GA(PSU)C*GAC
- Length
- 7 nucleotides
- Bulged bases
- 8SCB|1|5|A|4292
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8SCB_133 not in the Motif Atlas
- Geometric match to IL_2O3X_003
- Geometric discrepancy: 0.1897
- The information below is about IL_2O3X_003
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_61702.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
8SCB|1|5|G|4291
8SCB|1|5|A|4292
8SCB|1|5|PSU|4293
8SCB|1|5|C|4294
*
8SCB|1|5|G|4316
8SCB|1|5|A|4317
8SCB|1|5|C|4318
Current chains
- Chain 5
- 28S_rRNA
Nearby chains
- Chain T
- eL21
- Chain b
- 60S ribosomal protein L29
- Chain o
- eL42
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