IL_8SCB_137

3D structure

PDB id

8SCB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Terminating ribosome with SRI-41315

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GGC(PSU)UG*UGA(PSU)CC

Length

12 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8SCB|1|5|G|4400
8SCB|1|5|G|4401
8SCB|1|5|C|4402
8SCB|1|5|PSU|4403
8SCB|1|5|U|4404
8SCB|1|5|G|4405
*
8SCB|1|5|U|4439
8SCB|1|5|G|4440
8SCB|1|5|A|4441
8SCB|1|5|PSU|4442
8SCB|1|5|C|4443
8SCB|1|5|C|4444

Current chains

Chain 5

28S_rRNA

Nearby chains

Chain B

Ribosomal protein L3

Chain I

60S ribosomal protein L10

Chain b

60S ribosomal protein L29

Chain ii

Eukaryotic peptide chain release factor subunit 1