IL_8SCB_155

3D structure

PDB id

8SCB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Terminating ribosome with SRI-41315

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UGUAU(OMG)U*GCGAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8SCB|1|5|U|4632
8SCB|1|5|G|4633
8SCB|1|5|U|4634
8SCB|1|5|A|4635
8SCB|1|5|U|4636
8SCB|1|5|OMG|4637
8SCB|1|5|U|4638
*
8SCB|1|5|G|4661
8SCB|1|5|C|4662
8SCB|1|5|G|4663
8SCB|1|5|A|4664
8SCB|1|5|A|4665
8SCB|1|5|G|4666

Current chains

Chain 5

28S_rRNA

Nearby chains

Chain B

Ribosomal protein L3

Chain W

60S ribosomal protein L24

Chain d

eL31