IL_8SCB_172

3D structure

PDB id

8SCB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Terminating ribosome with SRI-41315

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

8SCB|1|5|G|5041

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8SCB|1|5|U|5003
8SCB|1|5|C|5004
8SCB|1|5|G|5005
8SCB|1|5|U|5006
8SCB|1|5|A|5007
8SCB|1|5|C|5008
8SCB|1|5|G|5009
*
8SCB|1|5|U|5039
8SCB|1|5|U|5040
8SCB|1|5|G|5041
8SCB|1|5|A|5042
8SCB|1|5|A|5043
8SCB|1|5|A|5044

Current chains

Chain 5

28S_rRNA

Nearby chains

Chain B

Ribosomal protein L3

Chain W

60S ribosomal protein L24

Chain d

eL31