IL_8SCB_195

3D structure

PDB id

8SCB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Terminating ribosome with SRI-41315

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CUGU*AG(A2M)G

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8SCB_195 not in the Motif Atlas

Homologous match to IL_8C3A_403

Geometric discrepancy: 0.1676

The information below is about IL_8C3A_403

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86374.1

Basepair signature

cWW-L-R-L-R-cWW

Number of instances in this motif group

5

Unit IDs

8SCB|1|9|C|151
8SCB|1|9|U|152
8SCB|1|9|G|153
8SCB|1|9|U|154
*
8SCB|1|9|A|164
8SCB|1|9|G|165
8SCB|1|9|A2M|166
8SCB|1|9|G|167

Current chains

Chain 9

18S_rRNA

Nearby chains

Chain GG

eS6

Chain YY

40S ribosomal protein S24