IL_8SCB_197

3D structure

PDB id

8SCB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Terminating ribosome with SRI-41315

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GCA(PSU)U*ACCUCGGGCC

Length

15 nucleotides

Bulged bases

8SCB|1|9|G|308

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8SCB|1|9|G|215
8SCB|1|9|C|216
8SCB|1|9|A|217
8SCB|1|9|PSU|218
8SCB|1|9|U|219
*
8SCB|1|9|A|302
8SCB|1|9|C|303
8SCB|1|9|C|304
8SCB|1|9|U|305
8SCB|1|9|C|306
8SCB|1|9|G|307
8SCB|1|9|G|308
8SCB|1|9|G|309
8SCB|1|9|C|310
8SCB|1|9|C|311

Current chains

Chain 9

18S_rRNA

Nearby chains

Chain EE

eS4 (S4 X isoform)

Chain II

eS8