IL_8SCB_204
3D structure
- PDB id
- 8SCB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Terminating ribosome with SRI-41315
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- CAUC*G(A2M)AG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8SCB_204 not in the Motif Atlas
- Geometric match to IL_4EYA_010
- Geometric discrepancy: 0.2858
- The information below is about IL_4EYA_010
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
8SCB|1|9|C|459
8SCB|1|9|A|460
8SCB|1|9|U|461
8SCB|1|9|C|462
*
8SCB|1|9|G|467
8SCB|1|9|A2M|468
8SCB|1|9|A|469
8SCB|1|9|G|470
Current chains
- Chain 9
- 18S_rRNA
Nearby chains
- Chain GG
- eS6
- Chain V
- Ribosomal protein L23
- Chain W
- 60S ribosomal protein L24
- Chain jj
- ATP binding cassette subfamily E member 1
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