IL_8SCB_255
3D structure
- PDB id
- 8SCB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Terminating ribosome with SRI-41315
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- C(4AC)G*CA(OMG)G
- Length
- 7 nucleotides
- Bulged bases
- 8SCB|1|9|A|1489
- QA status
- Modified nucleotides: 4AC, OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8SCB_255 not in the Motif Atlas
- Geometric match to IL_5TBW_079
- Geometric discrepancy: 0.1277
- The information below is about IL_5TBW_079
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
8SCB|1|9|C|1336
8SCB|1|9|4AC|1337
8SCB|1|9|G|1338
*
8SCB|1|9|C|1488
8SCB|1|9|A|1489
8SCB|1|9|OMG|1490
8SCB|1|9|G|1491
Current chains
- Chain 9
- 18S_rRNA
Nearby chains
- Chain CC
- uS5
- Chain DD
- Ribosomal protein S3
- Chain QQ
- uS9
- Chain UU
- uS10
- Chain dd
- uS14
- Chain ii
- Eukaryotic peptide chain release factor subunit 1
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