IL_8SCB_276
3D structure
- PDB id
- 8SCB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Terminating ribosome with SRI-41315
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- UGAG*CGAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8SCB_276 not in the Motif Atlas
- Homologous match to IL_8C3A_478
- Geometric discrepancy: 0.0744
- The information below is about IL_8C3A_478
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.13
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 34
Unit IDs
8SCB|1|9|U|1733
8SCB|1|9|G|1734
8SCB|1|9|A|1735
8SCB|1|9|G|1736
*
8SCB|1|9|C|1798
8SCB|1|9|G|1799
8SCB|1|9|A|1800
8SCB|1|9|A|1801
Current chains
- Chain 9
- 18S_rRNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain GG
- eS6
- Chain II
- eS8
- Chain W
- 60S ribosomal protein L24
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