IL_8SCB_281

3D structure

PDB id

8SCB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Terminating ribosome with SRI-41315

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CGG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8SCB_281 not in the Motif Atlas

Geometric match to IL_1U6B_005

Geometric discrepancy: 0.2622

The information below is about IL_1U6B_005

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_71625.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

65

Unit IDs

8SCB|1|9|C|1756
8SCB|1|9|G|1757
8SCB|1|9|G|1758
*
8SCB|1|9|C|1774
8SCB|1|9|U|1775
8SCB|1|9|G|1776

Current chains

Chain 9

18S_rRNA

Nearby chains

Chain GG

eS6