3D structure

PDB id
8SCB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Terminating ribosome with SRI-41315
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
UAUAGACAGC*GCCGAA
Length
16 nucleotides
Bulged bases
8SCB|1|5|A|1960
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8SCB|1|5|U|1957
8SCB|1|5|A|1958
8SCB|1|5|U|1959
8SCB|1|5|A|1960
8SCB|1|5|G|1961
8SCB|1|5|A|1962
8SCB|1|5|C|1963
8SCB|1|5|A|1964
8SCB|1|5|G|1965
8SCB|1|5|C|1966
*
8SCB|1|5|G|2021
8SCB|1|5|C|2022
8SCB|1|5|C|2023
8SCB|1|5|G|2024
8SCB|1|5|A|2025
8SCB|1|5|A|2026

Current chains

Chain 5
28S_rRNA

Nearby chains

Chain m
Ubiquitin A-52 residue ribosomal protein fusion product 1
Chain s
60S acidic ribosomal protein P0

Coloring options:

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