IL_8SCB_320
3D structure
- PDB id
- 8SCB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Terminating ribosome with SRI-41315
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- GAAAAAA(PSU)(PSU)*ACCGCAGC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8SCB_320 not in the Motif Atlas
- Homologous match to IL_8C3A_503
- Geometric discrepancy: 0.471
- The information below is about IL_8C3A_503
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44416.1
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
8SCB|1|9|G|807
8SCB|1|9|A|808
8SCB|1|9|A|809
8SCB|1|9|A|810
8SCB|1|9|A|811
8SCB|1|9|A|812
8SCB|1|9|A|813
8SCB|1|9|PSU|814
8SCB|1|9|PSU|815
*
8SCB|1|9|A|849
8SCB|1|9|C|850
8SCB|1|9|C|851
8SCB|1|9|G|852
8SCB|1|9|C|853
8SCB|1|9|A|854
8SCB|1|9|G|855
8SCB|1|9|C|856
Current chains
- Chain 9
- 18S_rRNA
Nearby chains
- Chain EE
- eS4 (S4 X isoform)
- Chain JJ
- uS4
- Chain LL
- uS17
- Chain WW
- uS8
Coloring options: