IL_8SPQ_005
3D structure
- PDB id
- 8SPQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SpRY-Cas9:gRNA complex targeting TGG PAM DNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.26 Å
Loop
- Sequence
- UAAAG*CTTTA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8SPQ|1|B|U|7
8SPQ|1|B|A|8
8SPQ|1|B|A|9
8SPQ|1|B|A|10
8SPQ|1|B|G|11
*
8SPQ|1|E|DC|6
8SPQ|1|E|DT|7
8SPQ|1|E|DT|8
8SPQ|1|E|DT|9
8SPQ|1|E|DA|10
Current chains
- Chain B
- gRNA
- Chain E
- TS
Nearby chains
- Chain A
- CRISPR-associated endonuclease Cas9/Csn1
Coloring options: