3D structure

PDB id
8SUP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 48S translation initiation complex assembled on the encephalomyocarditis virus IRES
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
GU*ACC
Length
5 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8SUP|1|3|G|577
8SUP|1|3|U|578
*
8SUP|1|3|A|590
8SUP|1|3|C|591
8SUP|1|3|C|592

Current chains

Chain 3
EMCV mRNA

Nearby chains

No other chains within 10Å

Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 0.0807 s