IL_8T2X_070
3D structure
- PDB id
- 8T2X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, A-site tRNA, messenger RNA and eIF5A, PRE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.46 Å
Loop
- Sequence
- UUAUCA*UCUUAUG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8T2X_070 not in the Motif Atlas
- Homologous match to IL_8P9A_300
- Geometric discrepancy: 0.0842
- The information below is about IL_8P9A_300
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_23038.1
- Basepair signature
- cWW-L-R-tWH-L-R-L-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
8T2X|1|A1|U|1702
8T2X|1|A1|U|1703
8T2X|1|A1|A|1704
8T2X|1|A1|U|1705
8T2X|1|A1|C|1706
8T2X|1|A1|A|1707
*
8T2X|1|A1|U|1737
8T2X|1|A1|C|1738
8T2X|1|A1|U|1739
8T2X|1|A1|U|1740
8T2X|1|A1|A|1741
8T2X|1|A1|U|1742
8T2X|1|A1|G|1743
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain Ag
- 60S ribosomal protein L34-A
Coloring options: