IL_8T2X_094
3D structure
- PDB id
- 8T2X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, A-site tRNA, messenger RNA and eIF5A, PRE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.46 Å
Loop
- Sequence
- AGGGUGUAGAAUAAGUGG*CCACUACCU
- Length
- 27 nucleotides
- Bulged bases
- 8T2X|1|A1|U|2453, 8T2X|1|A1|A|2458, 8T2X|1|A1|A|2459, 8T2X|1|A1|U|2460, 8T2X|1|A1|A|2461, 8T2X|1|A1|A|2462, 8T2X|1|A1|C|2492
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8T2X|1|A1|A|2449
8T2X|1|A1|G|2450
8T2X|1|A1|G|2451
8T2X|1|A1|G|2452
8T2X|1|A1|U|2453
8T2X|1|A1|G|2454
8T2X|1|A1|U|2455
8T2X|1|A1|A|2456
8T2X|1|A1|G|2457
8T2X|1|A1|A|2458
8T2X|1|A1|A|2459
8T2X|1|A1|U|2460
8T2X|1|A1|A|2461
8T2X|1|A1|A|2462
8T2X|1|A1|G|2463
8T2X|1|A1|U|2464
8T2X|1|A1|G|2465
8T2X|1|A1|G|2466
*
8T2X|1|A1|C|2489
8T2X|1|A1|C|2490
8T2X|1|A1|A|2491
8T2X|1|A1|C|2492
8T2X|1|A1|U|2493
8T2X|1|A1|A|2494
8T2X|1|A1|C|2495
8T2X|1|A1|C|2496
8T2X|1|A1|U|2497
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain BB
- RPS1A isoform 1
- Chain BF
- Rps5p
- Chain E
- RPL1A isoform 1
Coloring options: