IL_8T2X_187

3D structure

PDB id

8T2X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, A-site tRNA, messenger RNA and eIF5A, PRE

Experimental method

ELECTRON MICROSCOPY

Resolution

2.46 Å

Loop

Sequence

CGUUUGG*CCAUCG

Length

13 nucleotides

Bulged bases

8T2X|1|B5|U|820, 8T2X|1|B5|G|823, 8T2X|1|B5|A|850

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8T2X|1|B5|C|818
8T2X|1|B5|G|819
8T2X|1|B5|U|820
8T2X|1|B5|U|821
8T2X|1|B5|U|822
8T2X|1|B5|G|823
8T2X|1|B5|G|824
*
8T2X|1|B5|C|848
8T2X|1|B5|C|849
8T2X|1|B5|A|850
8T2X|1|B5|U|851
8T2X|1|B5|C|852
8T2X|1|B5|G|853

Current chains

Chain B5

18S rRNA

Nearby chains

Chain AR

60S ribosomal protein L19-A

Chain BH

40S ribosomal protein S7-A