IL_8T2Y_145
3D structure
- PDB id
- 8T2Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, PRE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- UCAAA*(PSU)GACAA
- Length
- 11 nucleotides
- Bulged bases
- 8T2Y|1|B5|A|468
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8T2Y_145 not in the Motif Atlas
- Homologous match to IL_8P9A_375
- Geometric discrepancy: 0.1026
- The information below is about IL_8P9A_375
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12697.1
- Basepair signature
- cWW-cWW-L-R-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
8T2Y|1|B5|U|37
8T2Y|1|B5|C|38
8T2Y|1|B5|A|39
8T2Y|1|B5|A|40
8T2Y|1|B5|A|41
*
8T2Y|1|B5|PSU|466
8T2Y|1|B5|G|467
8T2Y|1|B5|A|468
8T2Y|1|B5|C|469
8T2Y|1|B5|A|470
8T2Y|1|B5|A|471
Current chains
- Chain B5
- 18S rRNA
Nearby chains
- Chain BE
- 40S ribosomal protein S4-A
- Chain BJ
- 40S ribosomal protein S9-A
- Chain BY
- 40S ribosomal protein S24-A
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