3D structure

PDB id
8T2Z (explore in PDB, NAKB, or RNA 3D Hub)
Description
Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, POST
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
UCUAGACAGCC*GGCCGAA
Length
18 nucleotides
Bulged bases
8T2Z|1|A1|A|1221
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8T2Z|1|A1|U|1218
8T2Z|1|A1|C|1219
8T2Z|1|A1|U|1220
8T2Z|1|A1|A|1221
8T2Z|1|A1|G|1222
8T2Z|1|A1|A|1223
8T2Z|1|A1|C|1224
8T2Z|1|A1|A|1225
8T2Z|1|A1|G|1226
8T2Z|1|A1|C|1227
8T2Z|1|A1|C|1228
*
8T2Z|1|A1|G|1281
8T2Z|1|A1|G|1282
8T2Z|1|A1|C|1283
8T2Z|1|A1|C|1284
8T2Z|1|A1|G|1285
8T2Z|1|A1|A|1286
8T2Z|1|A1|A|1287

Current chains

Chain A1
25S rRNA

Nearby chains

Chain AS
60S ribosomal protein L20

Coloring options:

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