IL_8T2Z_094
3D structure
- PDB id
- 8T2Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, POST
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GG*CAC
- Length
- 5 nucleotides
- Bulged bases
- 8T2Z|1|A1|A|2626
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8T2Z_094 not in the Motif Atlas
- Homologous match to IL_8P9A_325
- Geometric discrepancy: 0.0421
- The information below is about IL_8P9A_325
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 130
Unit IDs
8T2Z|1|A1|G|2614
8T2Z|1|A1|G|2615
*
8T2Z|1|A1|C|2625
8T2Z|1|A1|A|2626
8T2Z|1|A1|C|2627
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AI
- RPL10 isoform 1
- Chain AT
- 60S ribosomal protein L21-A
- Chain Ab
- RPL29 isoform 1
- Chain Ao
- 60S ribosomal protein L42-A
- Chain tP
- Transfer RNA; tRNA
Coloring options: