IL_8T2Z_122

3D structure

PDB id

8T2Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, POST

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AGCAACG*UUGCU

Length

12 nucleotides

Bulged bases

8T2Z|1|A1|U|3259

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8T2Z|1|A1|A|3223
8T2Z|1|A1|G|3224
8T2Z|1|A1|C|3225
8T2Z|1|A1|A|3226
8T2Z|1|A1|A|3227
8T2Z|1|A1|C|3228
8T2Z|1|A1|G|3229
*
8T2Z|1|A1|U|3258
8T2Z|1|A1|U|3259
8T2Z|1|A1|G|3260
8T2Z|1|A1|C|3261
8T2Z|1|A1|U|3262

Current chains

Chain A1

25S rRNA

Nearby chains

Chain AE

60S ribosomal protein L6-A

Chain AM

60S ribosomal protein L14-A

Chain AO

60S ribosomal protein L16-A