IL_8T30_212
3D structure
- PDB id
- 8T30 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypomethylated yeast 80S bound with cycloheximide, unmodified U2921, mid rotated
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.88 Å
Loop
- Sequence
- CUAAAUA*UUCUUAG
- Length
- 14 nucleotides
- Bulged bases
- 8T30|1|B5|A|1346, 8T30|1|B5|U|1347
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8T30|1|B5|C|1342
8T30|1|B5|U|1343
8T30|1|B5|A|1344
8T30|1|B5|A|1345
8T30|1|B5|A|1346
8T30|1|B5|U|1347
8T30|1|B5|A|1348
*
8T30|1|B5|U|1377
8T30|1|B5|U|1378
8T30|1|B5|C|1379
8T30|1|B5|U|1380
8T30|1|B5|U|1381
8T30|1|B5|A|1382
8T30|1|B5|G|1383
Current chains
- Chain B5
- 18S rRNA
Nearby chains
- Chain BD
- RPS3 isoform 1
- Chain BQ
- 40S ribosomal protein S16-A
- Chain BU
- RPS20 isoform 1
- Chain Bg
- Guanine nucleotide-binding protein subunit beta-like protein
Coloring options: