IL_8T30_233

3D structure

PDB id

8T30 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Hypomethylated yeast 80S bound with cycloheximide, unmodified U2921, mid rotated

Experimental method

ELECTRON MICROSCOPY

Resolution

2.88 Å

Loop

Sequence

UG*UUUGUA

Length

8 nucleotides

Bulged bases

8T30|1|A1|U|252

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8T30|1|A1|U|169
8T30|1|A1|G|170
*
8T30|1|A1|U|248
8T30|1|A1|U|249
8T30|1|A1|U|250
8T30|1|A1|G|251
8T30|1|A1|U|252
8T30|1|A1|A|253

Current chains

Chain A1

25S rRNA

Nearby chains

Chain AG

60S ribosomal protein L8-A

Chain AL

60S ribosomal protein L13-A

Chain Ah

60S ribosomal protein L35-A