IL_8T3D_066
3D structure
- PDB id
- 8T3D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure III
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.95 Å
Loop
- Sequence
- AUUCUUC*GGAAUAGUU
- Length
- 16 nucleotides
- Bulged bases
- 8T3D|1|A1|U|1629, 8T3D|1|A1|U|1815, 8T3D|1|A1|A|1816, 8T3D|1|A1|G|1817
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8T3D|1|A1|A|1625
8T3D|1|A1|U|1626
8T3D|1|A1|U|1627
8T3D|1|A1|C|1628
8T3D|1|A1|U|1629
8T3D|1|A1|U|1630
8T3D|1|A1|C|1631
*
8T3D|1|A1|G|1811
8T3D|1|A1|G|1812
8T3D|1|A1|A|1813
8T3D|1|A1|A|1814
8T3D|1|A1|U|1815
8T3D|1|A1|A|1816
8T3D|1|A1|G|1817
8T3D|1|A1|U|1818
8T3D|1|A1|U|1819
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AZ
- 60S ribosomal protein L27-A
Coloring options: