IL_8T6S_004
3D structure
- PDB id
- 8T6S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SpRY-Cas9:gRNA complex targeting TAC PAM DNA with 10 bp R-loop
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- GAC*GTC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8T6S|1|B|G|16
8T6S|1|B|A|17
8T6S|1|B|C|18
*
8T6S|1|C|DG|22
8T6S|1|C|DT|23
8T6S|1|C|DC|24
Current chains
- Chain B
- gRNA
- Chain C
- TS
Nearby chains
- Chain A
- CRISPR-associated endonuclease Cas9/Csn1
Coloring options: