IL_8T8C_132
3D structure
- PDB id
- 8T8C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site formyl-MFI-tripeptidyl-tRNA analog ACCA-IFMf at 2.60A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- GGAAGAAGC*GUGUAAAC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8T8C_132 not in the Motif Atlas
- Homologous match to IL_6CZR_129
- Geometric discrepancy: 0.146
- The information below is about IL_6CZR_129
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_58819.1
- Basepair signature
- cWW-L-R-tWH-R-L-tHW-tSS-R-L-R-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
8T8C|1|1a|G|409
8T8C|1|1a|G|410
8T8C|1|1a|A|411
8T8C|1|1a|A|412
8T8C|1|1a|G|413
8T8C|1|1a|A|414
8T8C|1|1a|A|415
8T8C|1|1a|G|416
8T8C|1|1a|C|417
*
8T8C|1|1a|G|426
8T8C|1|1a|U|427
8T8C|1|1a|G|428
8T8C|1|1a|U|429
8T8C|1|1a|A|430
8T8C|1|1a|A|431
8T8C|1|1a|A|432
8T8C|1|1a|C|433
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1d
- 30S ribosomal protein S4
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