IL_8T8C_294
3D structure
- PDB id
- 8T8C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site formyl-MFI-tripeptidyl-tRNA analog ACCA-IFMf at 2.60A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- CCUAAG*UAG
- Length
- 9 nucleotides
- Bulged bases
- 8T8C|1|2a|C|48, 8T8C|1|2a|A|51
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8T8C_294 not in the Motif Atlas
- Homologous match to IL_6CZR_115
- Geometric discrepancy: 0.174
- The information below is about IL_6CZR_115
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14177.1
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
8T8C|1|2a|C|47
8T8C|1|2a|C|48
8T8C|1|2a|U|49
8T8C|1|2a|A|50
8T8C|1|2a|A|51
8T8C|1|2a|G|52
*
8T8C|1|2a|U|359
8T8C|1|2a|A|360
8T8C|1|2a|G|361
Current chains
- Chain 2a
- 16S Ribosomal RNA
Nearby chains
- Chain 2l
- 30S ribosomal protein S12
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