3D structure

PDB id
8TSV (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Zika virus stem-loop A (SLA) top stem
Experimental method
X-RAY DIFFRACTION
Resolution
1.51 Å

Loop

Sequence
UGC*GA
Length
5 nucleotides
Bulged bases
8TSV|1|C|G|7
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
Single bulged G
Broad Annotation
No text annotation
Motif group
IL_00225.11
Basepair signature
cWW-L-cWW
Number of instances in this motif group
46

Unit IDs

8TSV|1|C|U|6
8TSV|1|C|G|7
8TSV|1|C|C|8
*
8TSV|1|D|G|19
8TSV|1|D|A|20

Current chains

Chain C
Zika virus stem-loop A (SLA) top stem
Chain D
Zika virus stem-loop A (SLA) top stem

Nearby chains

No other chains within 10Å

Coloring options:

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