IL_8UB7_006

3D structure

PDB id

8UB7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Diversity-generating retroelement (DGR) ribonucleoprotein reverse transcriptase - Active state (N-occupied)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CAAAAC*GGGG

Length

10 nucleotides

Bulged bases

8UB7|1|I|G|131

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UB7|1|I|C|99
8UB7|1|I|A|100
8UB7|1|I|A|101
8UB7|1|I|A|102
8UB7|1|I|A|103
8UB7|1|I|C|104
*
8UB7|1|I|G|129
8UB7|1|I|G|130
8UB7|1|I|G|131
8UB7|1|I|G|132

Current chains

Chain I

Diversity-generating retroelement (DGR) RNA Sp

Nearby chains

Chain A

Reverse transcriptase