IL_8UD6_040

3D structure

PDB id

8UD6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GUGGC*GCCAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UD6|1|1A|G|1059
8UD6|1|1A|U|1060
8UD6|1|1A|G|1062
8UD6|1|1A|G|1063
8UD6|1|1A|C|1064
*
8UD6|1|1A|G|1074
8UD6|1|1A|C|1075
8UD6|1|1A|C|1076
8UD6|1|1A|A|1077
8UD6|1|1A|U|1078
8UD6|1|1A|C|1079

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains