IL_8UIY_069

3D structure

PDB id

8UIY (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

CGGUAA*UAAAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UIY|1|L5|C|1732
8UIY|1|L5|G|1733
8UIY|1|L5|G|1734
8UIY|1|L5|U|1735
8UIY|1|L5|A|1736
8UIY|1|L5|A|1737
*
8UIY|1|L5|U|1792
8UIY|1|L5|A|1793
8UIY|1|L5|A|1794
8UIY|1|L5|A|1795
8UIY|1|L5|U|1796
8UIY|1|L5|G|1797

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L7

5S ribosomal RNA; 5S rRNA

Chain LF

60S ribosomal protein L7

Chain LI

Ribosomal protein uL16-like

Chain LS

60S ribosomal protein L18a

Chain LT

60S ribosomal protein L21