IL_8UIY_079

3D structure

PDB id

8UIY (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

CGCCCGAUGC*GGG

Length

13 nucleotides

Bulged bases

8UIY|1|L5|G|1919

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UIY|1|L5|C|1911
8UIY|1|L5|G|1912
8UIY|1|L5|C|1913
8UIY|1|L5|C|1914
8UIY|1|L5|C|1915
8UIY|1|L5|G|1916
8UIY|1|L5|A|1917
8UIY|1|L5|U|1918
8UIY|1|L5|G|1919
8UIY|1|L5|C|1920
*
8UIY|1|L5|G|2063
8UIY|1|L5|G|2064
8UIY|1|L5|G|2065

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LF

60S ribosomal protein L7

Chain LO

60S ribosomal protein L13a

Chain LS

60S ribosomal protein L18a

Chain Lf

60S ribosomal protein L35a