IL_8UIY_266
3D structure
- PDB id
- 8UIY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human P-Z state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.44 Å
Loop
- Sequence
- GCUCAGCGUGUGCCUACC*GUAACCCGUUGAACCC
- Length
- 34 nucleotides
- Bulged bases
- 8UIY|1|S2|A|1580, 8UIY|1|S2|C|1581, 8UIY|1|S2|U|1585, 8UIY|1|S2|G|1587
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UIY|1|S2|G|1541
8UIY|1|S2|C|1542
8UIY|1|S2|U|1543
8UIY|1|S2|C|1544
8UIY|1|S2|A|1545
8UIY|1|S2|G|1546
8UIY|1|S2|C|1547
8UIY|1|S2|G|1548
8UIY|1|S2|U|1549
8UIY|1|S2|G|1550
8UIY|1|S2|U|1551
8UIY|1|S2|G|1552
8UIY|1|S2|C|1553
8UIY|1|S2|C|1554
8UIY|1|S2|U|1555
8UIY|1|S2|A|1556
8UIY|1|S2|C|1557
8UIY|1|S2|C|1558
*
8UIY|1|S2|G|1577
8UIY|1|S2|U|1578
8UIY|1|S2|A|1579
8UIY|1|S2|A|1580
8UIY|1|S2|C|1581
8UIY|1|S2|C|1582
8UIY|1|S2|C|1583
8UIY|1|S2|G|1584
8UIY|1|S2|U|1585
8UIY|1|S2|U|1586
8UIY|1|S2|G|1587
8UIY|1|S2|A|1588
8UIY|1|S2|A|1589
8UIY|1|S2|C|1590
8UIY|1|S2|C|1591
8UIY|1|S2|C|1592
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SD
- Small ribosomal subunit protein uS3
- Chain SF
- 40S ribosomal protein S5
- Chain SK
- 40S ribosomal protein S10
- Chain SQ
- Small ribosomal subunit protein uS9
- Chain ST
- 40S ribosomal protein S19
- Chain SU
- 40S ribosomal protein S20
- Chain SZ
- Small ribosomal subunit protein eS25
- Chain Sd
- 40S ribosomal protein S29
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