IL_8UIY_270
3D structure
- PDB id
- 8UIY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human P-Z state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.44 Å
Loop
- Sequence
- GCCC*GUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UIY_270 not in the Motif Atlas
- Homologous match to IL_8P9A_453
- Geometric discrepancy: 0.0815
- The information below is about IL_8P9A_453
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_25873.1
- Basepair signature
- cWW-cSH-cWS-cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
8UIY|1|S2|G|1702
8UIY|1|S2|C|1703
8UIY|1|S2|C|1704
8UIY|1|S2|C|1705
*
8UIY|1|S2|G|1829
8UIY|1|S2|U|1830
8UIY|1|S2|A|1831
8UIY|1|S2|A|1832
8UIY|1|S2|C|1833
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain Ln
- 60S ribosomal protein L41
- Chain Pt
- Transfer RNA; tRNA
Coloring options: