IL_8UIZ_010

3D structure

PDB id

8UIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P-E state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CCGCUCGUGG*CGGCG

Length

15 nucleotides

Bulged bases

8UIZ|1|L5|C|183, 8UIZ|1|L5|G|188

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UIZ|1|L5|C|180
8UIZ|1|L5|C|181
8UIZ|1|L5|G|182
8UIZ|1|L5|C|183
8UIZ|1|L5|U|184
8UIZ|1|L5|C|185
8UIZ|1|L5|G|186
8UIZ|1|L5|U|187
8UIZ|1|L5|G|188
8UIZ|1|L5|G|189
*
8UIZ|1|L5|C|252
8UIZ|1|L5|G|253
8UIZ|1|L5|G|254
8UIZ|1|L5|C|255
8UIZ|1|L5|G|256

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LL

Large ribosomal subunit protein eL13

Chain Lh

60S ribosomal protein L35

Chain Lj

60S ribosomal protein L37