IL_8UIZ_012

3D structure

PDB id

8UIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P-E state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

GUC*GC

Length

5 nucleotides

Bulged bases

8UIZ|1|L5|U|200

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UIZ_012 not in the Motif Atlas

Homologous match to IL_8CRE_013

Geometric discrepancy: 0.193

The information below is about IL_8CRE_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

8UIZ|1|L5|G|199
8UIZ|1|L5|U|200
8UIZ|1|L5|C|201
*
8UIZ|1|L5|G|214
8UIZ|1|L5|C|215

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LY

60S ribosomal protein L26