IL_8UIZ_021

3D structure

PDB id

8UIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P-E state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

8UIZ|1|L5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UIZ|1|L5|A|466
8UIZ|1|L5|U|467
8UIZ|1|L5|U|468
8UIZ|1|L5|C|469
8UIZ|1|L5|A|470
8UIZ|1|L5|A|471
8UIZ|1|L5|C|472
*
8UIZ|1|L5|G|682
8UIZ|1|L5|C|683
8UIZ|1|L5|G|684
8UIZ|1|L5|C|685
8UIZ|1|L5|A|686
8UIZ|1|L5|U|687
8UIZ|1|L5|U|688
8UIZ|1|L5|U|689

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

Large ribosomal subunit protein eL6

Chain Lr

60S ribosomal protein L28