IL_8UIZ_026
3D structure
- PDB id
- 8UIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human P-E state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- GCCCGG*UCC
- Length
- 9 nucleotides
- Bulged bases
- 8UIZ|1|L5|C|501, 8UIZ|1|L5|C|502, 8UIZ|1|L5|C|503, 8UIZ|1|L5|G|504
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UIZ_026 not in the Motif Atlas
- Geometric match to IL_7KGA_003
- Geometric discrepancy: 0.3685
- The information below is about IL_7KGA_003
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_90729.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 30
Unit IDs
8UIZ|1|L5|G|500
8UIZ|1|L5|C|501
8UIZ|1|L5|C|502
8UIZ|1|L5|C|503
8UIZ|1|L5|G|504
8UIZ|1|L5|G|505
*
8UIZ|1|L5|U|653
8UIZ|1|L5|C|654
8UIZ|1|L5|C|655
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LC
- 60S ribosomal protein L4
- Chain LQ
- 60S ribosomal protein L18
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