IL_8UIZ_125

3D structure

PDB id

8UIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P-E state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

GACAUGAG*CUGAUCGUU

Length

17 nucleotides

Bulged bases

8UIZ|1|L5|A|3947

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UIZ|1|L5|G|3946
8UIZ|1|L5|A|3947
8UIZ|1|L5|C|3948
8UIZ|1|L5|A|3949
8UIZ|1|L5|U|3950
8UIZ|1|L5|G|3951
8UIZ|1|L5|A|3952
8UIZ|1|L5|G|3953
*
8UIZ|1|L5|C|4059
8UIZ|1|L5|U|4060
8UIZ|1|L5|G|4061
8UIZ|1|L5|A|4062
8UIZ|1|L5|U|4063
8UIZ|1|L5|C|4064
8UIZ|1|L5|G|4065
8UIZ|1|L5|U|4066
8UIZ|1|L5|U|4067

Current chains

Chain L5

28S rRNA

Nearby chains

Chain Li

60S ribosomal protein L36

Chain Lz

60S ribosomal protein L10a

Chain SB

40S ribosomal protein S3a