IL_8UIZ_265
3D structure
- PDB id
- 8UIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human P-E state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UIZ_265 not in the Motif Atlas
- Homologous match to IL_8CRE_468
- Geometric discrepancy: 0.0941
- The information below is about IL_8CRE_468
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 174
Unit IDs
8UIZ|1|S2|G|1706
8UIZ|1|S2|U|1707
8UIZ|1|S2|C|1708
*
8UIZ|1|S2|G|1826
8UIZ|1|S2|U|1827
8UIZ|1|S2|C|1828
Current chains
- Chain S2
- 18S rRNA [Homo sapiens]
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain Ln
- 60S ribosomal protein L41
- Chain Pt
- Transfer RNA; tRNA
Coloring options: