IL_8UIZ_269
3D structure
- PDB id
- 8UIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human P-E state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- UUG*CUA
- Length
- 6 nucleotides
- Bulged bases
- 8UIZ|1|S2|U|1721, 8UIZ|1|S2|U|1812
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UIZ_269 not in the Motif Atlas
- Homologous match to IL_8P9A_458
- Geometric discrepancy: 0.3455
- The information below is about IL_8P9A_458
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_97561.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 147
Unit IDs
8UIZ|1|S2|U|1720
8UIZ|1|S2|U|1721
8UIZ|1|S2|G|1722
*
8UIZ|1|S2|C|1811
8UIZ|1|S2|U|1812
8UIZ|1|S2|A|1813
Current chains
- Chain S2
- 18S rRNA [Homo sapiens]
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain LV
- 60S ribosomal protein L23
- Chain Ln
- 60S ribosomal protein L41
- Chain SX
- 40S ribosomal protein S23
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