IL_8UJ9_007

3D structure

PDB id

8UJ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

CGAAU*ACAUGUG

Length

12 nucleotides

Bulged bases

8UJ9|1|L5|G|119, 8UJ9|1|L5|U|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJ9|1|L5|C|118
8UJ9|1|L5|G|119
8UJ9|1|L5|A|120
8UJ9|1|L5|A|121
8UJ9|1|L5|U|122
*
8UJ9|1|L5|A|147
8UJ9|1|L5|C|148
8UJ9|1|L5|A|149
8UJ9|1|L5|U|150
8UJ9|1|L5|G|151
8UJ9|1|L5|U|152
8UJ9|1|L5|G|153

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain L8

5.8S ribosomal RNA; 5.8S rRNA

Chain LG

60S ribosomal protein L7a

Chain LN

60S ribosomal protein L15

Chain Lh

60S ribosomal protein L35